PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Home  BLAST  Prediction  RegMap  ATRM  Download  Help  About  Links
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D11G0524
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 188aa    MW: 21587.4 Da    PI: 8.5258
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D11G0524genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-1079123549
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                  ++ rr+++NRe+ArrsR RK++ +e+L++ v  L  eN++L ++l
  Gh_D11G0524  79 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRLENRELTNQL 123
                  5789***********************************999665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-1175139IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-1176124No hitNo description
PROSITE profilePS5021710.80677123IPR004827Basic-leucine zipper domain
PfamPF001704.1E-879123IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.72E-1179126No hitNo description
CDDcd147029.52E-2180131No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MLSTVPTVFS SGLMFDNDQY LALESGFTPW DCSELLSISQ TIEPAILGSV SDEPLQGHTN  60
SNSGSDEPNQ PDSSVIDERK RRRMISNRES ARRSRMRKQK HLENLRNQVN RLRLENRELT  120
NQLRLVLCHS HRVATDNDRL RSEHSILRRK LSDIHQILLL KQLQQFSSAW PCNNVVTVMS  180
DQTPPLIT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17882RKRRR
27899RKRRRMISNRESARRSRMRKQK
39198RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012489229.11e-134PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2P3K01e-134A0A0D2P3K0_G
STRINGVIT_00s0541g00020.t012e-63(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.12e-35basic leucine-zipper 7